Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
EZH2

Cell type

Cell type Class
Gonad
Cell type
SK-OV-3
Primary Tissue
Ovary
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
SKOV3 possessing homozygous mutation (C/C) at rs1192691
cell line
SKOV3(CC)
cell type
ovarian cancer
genotype
CC
chip antibody
EZH2 (#5246,CST)
treatment
untreated

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
39923323
Reads aligned (%)
96.6
Duplicates removed (%)
14.0
Number of peaks
2116 (qval < 1E-05)

hg19

Number of total reads
39923323
Reads aligned (%)
95.9
Duplicates removed (%)
14.2
Number of peaks
1102 (qval < 1E-05)

Base call quality data from DBCLS SRA